Installing R on ec2

README.md

@@ -180,3 +180,25 @@ python agg.py -i ../data/test1kb.pkl -c ../data/test1kbclustertable.pkl -o ../da
 ```
 
 Downloads new dataset from the `public.icp_sample_18m` sample and saves it to `../data/test1kb.pkl`. Then assigns clusters to this (excluding the misc/'-1' cluster) from the `../data/test1kagg.pkl` dataset with threshold 0.1, saving into `../data/test1kbclustertable.pkl`. Then aggregates this dataset and saves in `../data/test1kbagg.pkl`.
+
+## R
+
+The scripts in `R/` include visualisers for the data, and for the creation of some models.
+
+### Installing R
+
+To install R on an ec2 instance you need to run the following:
+
+```bash
+sudo yum install R
+sudo yum install R-devel
+sudo yum install libcurl-devel
+sudo ln -s /usr/lib64/libgfortran.so.3 /usr/lib64/libgfortran.so
+sudo ln -s /usr/lib64/libquadmath.so.0 /usr/lib64/libquadmath.so
+```
+
+To install the packages needed for these scripts you should run the following from within `R` itself:
+
+```R
+install.packages(c("dplyr", "tidyr", "ggplot2", "forecast", "TSA", "reticulate", "caTools", "scales", "optparse"))
+```