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@@ -72,7 +72,7 @@ def dendro(lobj, clustdf, numclusts, icps, fname):
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def main():
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parser = ArgumentParser(description='Cluster from pre-existing distance correlation matrix in pickled dataframe')
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parser.add_argument("-i", "--input", dest="input", help = "input pickle path; default: ../data/5kdcorrmatrix.pkl", metavar="[PATH]", default = "../data/5kdcorrmatrix.pkl")
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- parser.add_argument("-o", "--output", dest="output", help = "output pickle path; default: ../data/5kdcorrmatrix.pkl", metavar="[PATH]", default = "../data/5kdcorrmatrix.pkl")
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+ parser.add_argument("-o", "--output", dest="output", help = "output pickle path; default: ../data/5kdclustable.pkl", metavar="[PATH]", default = "../data/5kdclustable.pkl")
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parser.add_argument("--method", dest="method", help = "clustering method; default 'ward'", metavar = "[METHOD]", default = "ward")
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parser.add_argument("--clusters", dest="numclusters", help = "number of clusters; default: 9", metavar = "[NUM]", default = 9, type = int)
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parser.add_argument("-d", "--dendrogram", dest = "incdendro", help = "draw dendrogram", action ="store_true")
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